BLASTN 2.2.6 [Apr-09-2003]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rhodobacter SRF3
(20 letters)
Database: /db/genbank/GBfasta_140/gbbct
233,141 sequences; 781,815,084 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
GENBANK|AJ002565|MBAJ2565 Marine bacterium (isolate SRF3) 16S rRNA gene. 40 0.003
GENBANK|AY499668|AY499668 Uncultured alpha proteobacterium clone Dove... 40 0.003
GENBANK|AY323141|AY323141 Uncultured alpha proteobacterium clone A115... 40 0.003
GENBANK|AJ391183|MAL391183 marine alpha proteobacterium AS-22 partia... 38 0.010
GENBANK|AY258103|AY258103 Bacterium DG1133 small subunit ribosomal RN... 38 0.010
GENBANK|AY258076|AY258076 Bacterium DG877 small subunit ribosomal RNA... 38 0.010
GENBANK|AY136103|AY136103 Roseobacter sp. MED007 16S rRNA gene parti... 38 0.010
GENBANK|AJ133762|APR133762 alpha Proteobacterium 16S rRNA gene isola... 38 0.010
GENBANK|AB047139|AB047139 Uncultured eubacterium SW3 gene for 16S rRN... 38 0.010
GENBANK|AB018689|AB018689 Alpha proteobacterium MBIC3951 gene for 16S... 38 0.010
GENBANK|AJ487526|UCY487526 Uncultured cytophaga sp. partial 16S rRNA ... 34 0.16
GENBANK|AJ518280|UBA518280 Unidentified bacterium partial 16S rRNA ge... 34 0.16
GENBANK|AJ319865|UBA319865 Uncultured bacterium SB-83-CS partial 16S ... 34 0.16
GENBANK|AJ295441|UBA295441 Rape rhizosphere bacterium tsb051 partial ... 34 0.16
GENBANK|Y10171|RSRH16S Rhizobium sp. 16S rRNA gene strain RH 44 651bp. 34 0.16
GENBANK|Y10176|RS16SCIAM Rhizobium sp. 16S rRNA gene strain CIAM 2927. 34 0.16
GENBANK|D12790|PRU16SRRNA Phyllobacterium rubiacearum 16S rRNA gene. 34 0.16
GENBANK|D12789|PMY16SRRNA Phyllobacterium myrsinacearum 16S rRNA gene. 34 0.16
GENBANK|AJ011330|PMY011330 Phyllobacterium myrsinacearum 16S rRNA gen... 34 0.16
GENBANK|U37762|PLU37762 Prionitis lanceolata gall symbiont 16S riboso... 34 0.16
GENBANK|X98419|NSP16SRRP Nanobacterium sp. 16S rRNA gene partial. 34 0.16
GENBANK|X98418|NS16SRRNP N.sanguineum 16S rRNA gene partial. 34 0.16
GENBANK|AJ439363|MBA439363 alpha proteobacterium LTs-4 partial 16S rR... 34 0.16
GENBANK|X79412|DB16SRRN D.bakii 16S rDNA. 34 0.16
GENBANK|X98249|BS16SRRN Phyllobacterium sp. 16S rRNA gene. 34 0.16
GENBANK|AY515429|AY515429 Uncultured alpha proteobacterium strain GWS... 34 0.16
GENBANK|AY512821|AY512821 Phyllobacterium myrsinacearum 16S ribosomal... 34 0.16
GENBANK|AY437630|AY437630 Paracoccus sp. AI-21 16S ribosomal RNA gene... 34 0.16
GENBANK|AY424898|AY424898 Oceanicola batsensis strain HTCC2597 16S ri... 34 0.16
GENBANK|AY348736|AY348736 Uncultured alpha proteobacterium clone 4GB-... 34 0.16
GENBANK|AY345433|AY345433 Bacterium K2-19 16S ribosomal RNA gene par... 34 0.16
GENBANK|AY345413|AY345413 Bacterium K2-53B 16S ribosomal RNA gene pa... 34 0.16
GENBANK|AY344419|AY344419 Unidentified bacterium clone L4-84 16S ribo... 34 0.16
GENBANK|AY332145|AY332145 Alpha proteobacterium GWS-AG-H267 16S ribos... 34 0.16
GENBANK|AY327211|AY327211 Uncultured bacterium clone ZB31 16S ribosom... 34 0.16
GENBANK|AY323147|AY323147 Uncultured alpha proteobacterium clone A115... 34 0.16
GENBANK|AY323144|AY323144 Uncultured alpha proteobacterium clone A115... 34 0.16
GENBANK|AY263729|AY263729 Uncultured alpha proteobacterium clone FBR1... 34 0.16
GENBANK|AY258094|AY258094 Bacterium DG981 small subunit ribosomal RNA... 34 0.16
GENBANK|AY193283|AY193283 Uncultured proteobacterium clone BTM93 16S ... 34 0.16
GENBANK|AY193281|AY193281 Uncultured proteobacterium clone BTM81 16S ... 34 0.16
GENBANK|AY193233|AY193233 Uncultured proteobacterium clone BMS95 16S ... 34 0.16
GENBANK|AY193226|AY193226 Uncultured proteobacterium clone BMS38 16S ... 34 0.16
GENBANK|AY193221|AY193221 Uncultured proteobacterium clone BMS8 16S r... 34 0.16
GENBANK|AY193156|AY193156 Uncultured proteobacterium clone BMS13 16S ... 34 0.16
GENBANK|AY162112|AY162112 Alpha proteobacterium GMD13C04 small subuni... 34 0.16
GENBANK|AY162099|AY162099 Alpha proteobacterium GMD21G01 small subuni... 34 0.16
GENBANK|AY162095|AY162095 Alpha proteobacterium GMDsbM4 small subunit... 34 0.16
GENBANK|AY162085|AY162085 Alpha proteobacterium GMD38A8 small subunit... 34 0.16
GENBANK|AY148320|AY148320 Uncultured alpha proteobacterium B7-20G 16S... 34 0.16
GENBANK|AY075131|AY075131 Uncultured marine bacterium Vent 24 16S rib... 34 0.16
GENBANK|AF547039|AF547039 Bacterium 320 16S ribosomal RNA gene parti... 34 0.16
GENBANK|AF544961|AF544961 Uncultured alpha proteobacterium clone 6-7-... 34 0.16
GENBANK|AF544952|AF544952 Uncultured alpha proteobacterium clone 5-7-... 34 0.16
GENBANK|AF544949|AF544949 Uncultured alpha proteobacterium clone 3-7-... 34 0.16
GENBANK|AF544935|AF544935 Uncultured alpha proteobacterium clone 1-7-... 34 0.16
GENBANK|AF544898|AF544898 Uncultured alpha proteobacterium clone A191... 34 0.16
GENBANK|AF513936|AF513936 Uncultured Rhodobacter group bacterium clon... 34 0.16
GENBANK|AF513934|AF513934 Uncultured Rhodobacter group bacterium clon... 34 0.16
GENBANK|AF513437|AF513437 Rhodobacter group bacterium LA5 16S ribosom... 34 0.16
GENBANK|AF473967|AF473967 Uncultured alpha proteobacterium 34-34 16S ... 34 0.16
GENBANK|AF473965|AF473965 Uncultured alpha proteobacterium 34-27 16S ... 34 0.16
GENBANK|AF473915|AF473915 Uncultured alpha proteobacterium 128-19L 16... 34 0.16
GENBANK|AF473914|AF473914 Uncultured alpha proteobacterium 128-19 16S... 34 0.16
GENBANK|AF465360|AF465360 Ruegeria sp. UST991130-042 16S ribosomal RN... 34 0.16
GENBANK|AF449230|AF449230 Uncultured epsilon proteobacterium clone R1... 34 0.16
GENBANK|AF441726|AF441726 Alpha proteobacterium Kaza-27 16S ribosomal... 34 0.16
GENBANK|AF367399|AF367399 Uncultured Rhodobacter group bacterium clon... 34 0.16
GENBANK|AF290485|AF290485 Uncultured sheep mite bacterium Llangefni 8... 34 0.16
GENBANK|AF290484|AF290484 Uncultured sheep mite bacterium Llangefni 1... 34 0.16
GENBANK|AF290483|AF290483 Uncultured sheep mite bacterium Llangefni 2... 34 0.16
GENBANK|AF259635|AF259635 Uncultured Rhodobacter group bacterium Ctax... 34 0.16
GENBANK|AF259606|AF259606 Uncultured Ruegeria CtaxMed-21 16S ribosoma... 34 0.16
GENBANK|AF214121|AF214121 Bacterium P91635 16S ribosomal RNA gene pa... 34 0.16
GENBANK|AF214120|AF214120 Bacterium P91650 16S ribosomal RNA gene pa... 34 0.16
GENBANK|AF186702|AF186702 Phyllobacterium sp. MA2830 16S ribosomal RN... 34 0.16
GENBANK|AF159654|AF159654 Uncultured marine eubacterium HstpL2 16S ri... 34 0.16
GENBANK|AF107210|AF107210 Roseobacter sp. (Prionitis decipiens symbio... 34 0.16
GENBANK|AF013537|AF013537 Uncultivated soil bacterium clone C116 16S ... 34 0.16
GENBANK|AB116403|AB116403 Uncultured Bacteroidetes bacterium gene for... 34 0.16
GENBANK|AB100001|AB100001 Uncultured bacterium gene for 16S rRNA par... 34 0.16
GENBANK|AJ311503|UCY311503 Uncultured cytophaga Sau 2 partial 16S rR... 32 0.63
GENBANK|U42010|CSU42010 Capnocytophaga sp. 16S ribosomal RNA gene pa... 32 0.63
GENBANK|U41352|CSU41352 Capnocytophaga sp. LMG 12116 16S ribosomal RN... 32 0.63
GENBANK|U41348|CGU41348 Capnocytophaga granulosa LMG 12119 16S riboso... 32 0.63
GENBANK|U41347|CGU41347 Capnocytophaga granulosa LMG16022 T 16S ribos... 32 0.63
GENBANK|U41346|CGU41346 Capnocytophaga gingivalis LMG 12118 16S ribos... 32 0.63
GENBANK|X97248|CG16SRRN2 C.granulosa 16S rRNA gene. 32 0.63
GENBANK|X67608|CG16SR C.gingivalis gene for 16S ribosomal RNA. 32 0.63
GENBANK|L14639|CCYRRDE Capnocytophaga gingivalis 16S ribosomal RNA. 32 0.63
GENBANK|AY509333|AY509333 Uncultured Bacteroidetes bacterium clone Li... 32 0.63
GENBANK|AY499900|AY499900 Uncultured alpha proteobacterium clone Nube... 32 0.63
GENBANK|AY429468|AY429468 Capnocytophaga sp. P1 oral clone P4GA_52 16... 32 0.63
GENBANK|AY193260|AY193260 Uncultured proteobacterium clone BTM13 16S ... 32 0.63
GENBANK|AY193259|AY193259 Uncultured proteobacterium clone BTM1 16S r... 32 0.63
GENBANK|AY165584|AY165584 Uncultured Arctic sea ice bacterium clone A... 32 0.63
GENBANK|AY005074|AY005074 Capnocytophaga sp. oral clone AH015 16S rib... 32 0.63
GENBANK|AY005073|AY005073 Capnocytophaga sp. oral strain S3 16S ribos... 32 0.63
GENBANK|AF543295|AF543295 Capnocytophaga gingivalis 16S ribosomal RNA... 32 0.63
GENBANK|AF491883|AF491883 Flavobacteria symbiont 4 of Acromyrmex otco... 32 0.63
GENBANK|AF491882|AF491882 Flavobacteria symbiont 3 of Acromyrmex otco... 32 0.63
GENBANK|AF468274|AF468274 Uncultured bacterium clone ARKIA-130 16S ri... 32 0.63
GENBANK|AF385494|AF385494 Capnocytophaga sp. oral clone DZ074 16S rib... 32 0.63
GENBANK|AF277512|AF277512 Uncultured alpha proteobacterium SIC.8142 1... 32 0.63
GENBANK|AF201976|AF201976 Human oral bacterium AC62 16S ribosomal RNA... 32 0.63
GENBANK|AF142961|AF142961 Uncultured bacterium TAYNAYA-15 16S ribosom... 32 0.63
GENBANK|AF142958|AF142958 Uncultured bacterium TAYNAYA-12 16S ribosom... 32 0.63
GENBANK|AF142891|AF142891 Uncultured bacterium EKHO-8 16S ribosomal R... 32 0.63
GENBANK|AF142858|AF142858 Uncultured bacterium BURTON-40 16S ribosoma... 32 0.63
GENBANK|AF142829|AF142829 Uncultured bacterium BURTON-9 16S ribosomal... 32 0.63
GENBANK|AF030777|AF030777 Marine snow associated bacterium Adriatic86... 32 0.63
GENBANK|AB154459|AB154459 Uncultured bacterium gene for 16S rRNA par... 32 0.63
GENBANK|AB089021|AB089021 Uncultured Clostridiaceae bacterium gene fo... 32 0.63
GENBANK|AJ242822|UMA242822 Marine eubacterium 'DDGE band 5' mRNA for ... 30 2.5
GENBANK|U14583|UAU14583 Octadecabacter antarcticus 307 16S ribosomal ... 30 2.5
GENBANK|U70682|U70682 Unidentified alpha proteobacterium OM65 16S rib... 30 2.5
GENBANK|U73725|OAU73725 Octadecabacter arcticus 238 16S ribosomal RNA... 30 2.5
GENBANK|D88523|D88523 Agrobacterium gelatinovorum gene for 16S rRNA ... 30 2.5
GENBANK|L16495|BNRRR16SAV Bacteroides forsythus 16S ribosomal RNA gen... 30 2.5
GENBANK|X73962|BFRRNA B.forsythus gene for 16S rRNA. 30 2.5
GENBANK|AY500027|AY500027 Uncultured Bacteroidetes bacterium clone Nu... 30 2.5
GENBANK|AY499448|AY499448 Uncultured alpha proteobacterium clone RAN-... 30 2.5
GENBANK|AY499446|AY499446 Uncultured alpha proteobacterium clone RAN-... 30 2.5
GENBANK|AY499414|AY499414 Uncultured alpha proteobacterium clone RAI-... 30 2.5
GENBANK|AY442178|AY442178 Rhodobacteraceae bacterium JC2049 16S ribos... 30 2.5
GENBANK|AY360524|AY360524 Uncultured proteobacterium clone BSBf3-20/4... 30 2.5
GENBANK|AY360519|AY360519 Uncultured proteobacterium clone BSBd6-20/4... 30 2.5
GENBANK|AY360517|AY360517 Uncultured proteobacterium clone BSBb3-20/4... 30 2.5
GENBANK|AY349402|AY349402 Prevotella sp. oral clone IK062 16S ribosom... 30 2.5
GENBANK|AY349399|AY349399 Prevotella sp. oral clone HF050 16S ribosom... 30 2.5
GENBANK|AY348734|AY348734 Uncultured alpha proteobacterium clone 4GB-... 30 2.5
GENBANK|AY323154|AY323154 Uncultured alpha proteobacterium clone A115... 30 2.5
GENBANK|AY323151|AY323151 Uncultured alpha proteobacterium clone A133... 30 2.5
GENBANK|AY274236|AY274236 Uncultured alpha proteobacterium isolate DG... 30 2.5
GENBANK|AY274228|AY274228 Uncultured alpha proteobacterium isolate DG... 30 2.5
GENBANK|AY244953|AY244953 Uncultured rumen bacterium clone BE37 16S r... 30 2.5
GENBANK|AY244948|AY244948 Uncultured rumen bacterium clone BE21 16S r... 30 2.5
GENBANK|AY244946|AY244946 Uncultured rumen bacterium clone BE32 16S r... 30 2.5
GENBANK|AY244945|AY244945 Uncultured rumen bacterium clone BE30 16S r... 30 2.5
GENBANK|AY244937|AY244937 Uncultured rumen bacterium clone BE17 16S r... 30 2.5
GENBANK|AY244932|AY244932 Uncultured rumen bacterium clone BE22 16S r... 30 2.5
GENBANK|AY244929|AY244929 Uncultured rumen bacterium clone BE12 16S r... 30 2.5
GENBANK|AY244927|AY244927 Uncultured rumen bacterium clone BE10 16S r... 30 2.5
GENBANK|AY244924|AY244924 Uncultured rumen bacterium clone BE7 16S ri... 30 2.5
GENBANK|AY244909|AY244909 Uncultured rumen bacterium clone BF31 16S r... 30 2.5
GENBANK|AY244906|AY244906 Uncultured rumen bacterium clone BF28 16S r... 30 2.5
GENBANK|AY244901|AY244901 Uncultured rumen bacterium clone BF23 16S r... 30 2.5
GENBANK|AY244900|AY244900 Uncultured rumen bacterium clone BF22 16S r... 30 2.5
GENBANK|AY244899|AY244899 Uncultured rumen bacterium clone BF21 16S r... 30 2.5
GENBANK|AY244897|AY244897 Uncultured rumen bacterium clone BF19 16S r... 30 2.5
GENBANK|AY244879|AY244879 Uncultured rumen bacterium clone BF1 16S ri... 30 2.5
GENBANK|AY239007|AY239007 Marine bacterium HP24 16S ribosomal RNA gen... 30 2.5
GENBANK|AY171330|AY171330 Uncultured bacterium clone s38 16S ribosoma... 30 2.5
GENBANK|AY171321|AY171321 Uncultured bacterium clone s109 16S ribosom... 30 2.5
GENBANK|AY171302|AY171302 Uncultured bacterium clone s29 16S ribosoma... 30 2.5
GENBANK|AY167337|AY167337 Octadecabacter sp. ANT9202 16S ribosomal RN... 30 2.5
GENBANK|AY167336|AY167336 Octadecabacter sp. ANT9191 16S ribosomal RN... 30 2.5
GENBANK|AY167335|AY167335 Octadecabacter sp. ANT9190 16S ribosomal RN... 30 2.5
GENBANK|AY167258|AY167258 Octadecabacter sp. ANT9237 16S ribosomal RN... 30 2.5
GENBANK|AY167256|AY167256 Octadecabacter sp. ANT9232 16S ribosomal RN... 30 2.5
GENBANK|AY167255|AY167255 Octadecabacter sp. ANT9212 16S ribosomal RN... 30 2.5
GENBANK|AY167252|AY167252 Octadecabacter sp. ANT9035 16S ribosomal RN... 30 2.5
GENBANK|AY165579|AY165579 Uncultured Antarctic sea ice bacterium clon... 30 2.5
GENBANK|AY165505|AY165505 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165504|AY165504 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165503|AY165503 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165502|AY165502 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165501|AY165501 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165500|AY165500 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165499|AY165499 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165498|AY165498 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165497|AY165497 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165496|AY165496 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165495|AY165495 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165494|AY165494 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165493|AY165493 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165492|AY165492 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165491|AY165491 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165490|AY165490 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165489|AY165489 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165488|AY165488 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY165487|AY165487 Uncultured Rhodobacteraceae bacterium clone... 30 2.5
GENBANK|AY160809|AY160809 Uncultured bacterium clone COB P3-7 16S rib... 30 2.5
GENBANK|AY160806|AY160806 Uncultured bacterium clone COB P1-24 16S ri... 30 2.5
GENBANK|AY145628|AY145628 Uncultured alpha proteobacterium clone DC11... 30 2.5
GENBANK|AY145627|AY145627 Uncultured alpha proteobacterium clone DC11... 30 2.5
GENBANK|AY145625|AY145625 Uncultured alpha proteobacterium clone DC11... 30 2.5
GENBANK|AY145624|AY145624 Uncultured alpha proteobacterium clone DC11... 30 2.5
GENBANK|AY145590|AY145590 Uncultured alpha proteobacterium clone DC5-... 30 2.5
GENBANK|AY145589|AY145589 Uncultured alpha proteobacterium clone DC5-... 30 2.5
GENBANK|AY145588|AY145588 Uncultured alpha proteobacterium clone DC5-... 30 2.5
GENBANK|AY136124|AY136124 Roseobacter sp. RED15 16S ribosomal RNA gen... 30 2.5
GENBANK|AY135669|AY135669 Uncultured bacterium clone ANT18/2_19 16S r... 30 2.5
GENBANK|AY095827|AY095827 Uncultured Rhodobacter group bacterium ARCT... 30 2.5
GENBANK|AY095820|AY095820 Uncultured Rhodobacter group bacterium ARCT... 30 2.5
GENBANK|AF001377|APAF001377 Octadecobacter sp. IC146 16S ribosomal RN... 30 2.5
GENBANK|AF544926|AF544926 Uncultured alpha proteobacterium clone 4-6-... 30 2.5
GENBANK|AF544882|AF544882 Uncultured alpha proteobacterium clone D1-3... 30 2.5
GENBANK|AF544206|AF544206 Rumen bacterium YS1 16S ribosomal RNA gene ... 30 2.5
GENBANK|AF497867|AF497867 Uncultured alpha proteobacterium isolate WB... 30 2.5
GENBANK|AF497861|AF497861 Uncultured alpha proteobacterium isolate WM... 30 2.5
GENBANK|AF497860|AF497860 Uncultured alpha proteobacterium isolate WM... 30 2.5
GENBANK|AF497859|AF497859 Uncultured alpha proteobacterium isolate WM... 30 2.5
GENBANK|AF473978|AF473978 Uncultured alpha proteobacterium 34-65 16S ... 30 2.5
GENBANK|AF473977|AF473977 Uncultured bacterium 34-63 16S ribosomal RN... 30 2.5
GENBANK|AF473933|AF473933 Uncultured alpha proteobacterium 128-49 16S... 30 2.5
GENBANK|AF468379|AF468379 Arctic sea ice bacterium ARK10285 16S ribos... 30 2.5
GENBANK|AF468377|AF468377 Arctic sea ice bacterium ARK10249 16S ribos... 30 2.5
GENBANK|AF468372|AF468372 Arctic sea ice bacterium ARK10197 16S ribos... 30 2.5
GENBANK|AF468370|AF468370 Arctic sea ice bacterium ARK10176 16S ribos... 30 2.5
GENBANK|AF468369|AF468369 Arctic sea ice bacterium ARK10175-1 16S rib... 30 2.5
GENBANK|AF468368|AF468368 Arctic sea ice associated bacterium ARK1012... 30 2.5
GENBANK|AF468365|AF468365 Arctic sea ice bacterium ARK10099 16S ribos... 30 2.5
GENBANK|AF468364|AF468364 Arctic sea ice bacterium ARK10092 16S ribos... 30 2.5
GENBANK|AF468363|AF468363 Arctic sea ice bacterium ARK10090 16S ribos... 30 2.5
GENBANK|AF468362|AF468362 Arctic sea ice bacterium ARK10081 16S ribos... 30 2.5
GENBANK|AF468361|AF468361 Arctic sea ice bacterium ARK10073 16S ribos... 30 2.5
GENBANK|AF468356|AF468356 Arctic sea ice bacterium ARK10029 16S ribos... 30 2.5
GENBANK|AF468355|AF468355 Arctic sea ice bacterium ARK10026 16S ribos... 30 2.5
GENBANK|AF468321|AF468321 Uncultured bacterium clone ARKICE-158 16S r... 30 2.5
GENBANK|AF468299|AF468299 Uncultured bacterium clone ARKIA-135 16S ri... 30 2.5
GENBANK|AF440723|AF440723 Uncultured Rhodobacter group bacterium ARCT... 30 2.5
GENBANK|AF440715|AF440715 Uncultured Rhodobacter group bacterium ARCT... 30 2.5
GENBANK|AF440697|AF440697 Uncultured Rhodobacter group bacterium ARCT... 30 2.5
GENBANK|AF365998|AF365998 Marine alpha proteobacterium SB11 16S ribos... 30 2.5
GENBANK|AF353235|AF353235 Uncultured Roseobacter sp. clone Arctic96A-... 30 2.5
GENBANK|AF283847|AF283847 Arctic sea ice bacterium AWS-6M1 16S riboso... 30 2.5
GENBANK|AF283846|AF283846 Arctic sea ice bacterium AWS-4B3 16S riboso... 30 2.5
GENBANK|AF277545|AF277545 Uncultured Octadecabacter ARCTIC.235 16S ri... 30 2.5
GENBANK|AF277541|AF277541 Uncultured Octadecabacter ARCTIC.153 16S ri... 30 2.5
GENBANK|AF277539|AF277539 Uncultured Octadecabacter ARCTIC.128 16S ri... 30 2.5
GENBANK|AF245632|AF245632 Uncultured Roseobacter NAC11-3 16S ribosoma... 30 2.5
GENBANK|AF207853|AF207853 Uncultured marine eubacterium OTU_E 16S rib... 30 2.5
GENBANK|AF142851|AF142851 Uncultured bacterium BURTON-33 16S ribosoma... 30 2.5
GENBANK|AF058360|AF058360 Uncultured marine bacterium pM-68 16S ribos... 30 2.5
GENBANK|AF058339|AF058339 Uncultured marine bacterium pM-33 16S ribos... 30 2.5
GENBANK|AF055257|AF055257 Uncultured marine bacterium pC8-67 16S ribo... 30 2.5
GENBANK|AF055230|AF055230 Uncultured marine bacterium pC2-130 16S rib... 30 2.5
GENBANK|AF055225|AF055225 Uncultured marine bacterium pC2-12 16S ribo... 30 2.5
GENBANK|AF018540|AF018540 Unidentified rumen bacterium 30-46 16S ribo... 30 2.5
GENBANK|AF018530|AF018530 Unidentified rumen bacterium 30-36 16S ribo... 30 2.5
GENBANK|AF018500|AF018500 Unidentified rumen bacterium 30-1 16S ribos... 30 2.5
GENBANK|AF018477|AF018477 Unidentified rumen bacterium 12-70 16S ribo... 30 2.5
GENBANK|AF001771|AF001771 Unidentified rumen bacterium RF40 16S ribos... 30 2.5
GENBANK|AF001751|AF001751 Unidentified rumen bacterium RF19 16S ribos... 30 2.5
GENBANK|AB154432|AB154432 Uncultured bacterium gene for 16S rRNA par... 30 2.5
GENBANK|AB094833|AB094833 Uncultured bacterium gene for 16S rRNA par... 30 2.5
GENBANK|AB053947|AB053947 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053946|AB053946 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053945|AB053945 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053944|AB053944 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053943|AB053943 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053942|AB053942 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053941|AB053941 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053940|AB053940 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053939|AB053939 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB053938|AB053938 Tannerella forsythensis gene for 16S rRNA ... 30 2.5
GENBANK|AB035460|AB035460 Bacteroides forsythus gene for 16S rRNA pa... 30 2.5
GENBANK|AJ319866|UBA319866 Uncultured bacterium SB-25-CS partial 16S ... 28 9.8
GENBANK|AL603642|RME603642 Rhizobium meliloti (Sinorhizobium meliloti... 28 9.8
GENBANK|U15180|MLU15180 Mycobacterium leprae cosmid B1756. 28 9.8
GENBANK|AL583920|MLEPRTN4 Mycobacterium leprae strain TN complete gen... 28 9.8
GENBANK|AJ248285|CNSPAX03 Pyrococcus abyssi complete genome; segment ... 28 9.8
GENBANK|AY457130|AY457130 Uncultured Bacteroidetes bacterium clone 12... 28 9.8
GENBANK|AY457114|AY457114 Uncultured Bacteroidetes bacterium clone 81... 28 9.8
GENBANK|AY321386|AY321386 Uncultured bacterium clone K102 16S ribosom... 28 9.8
GENBANK|AP005084|AP005084 Vibrio parahaemolyticus DNA chromosome 2 ... 28 9.8
GENBANK|AP003587|AP003587 Nostoc sp. PCC 7120 DNA complete genome s... 28 9.8
GENBANK|AL627281|AL627281 Salmonella enterica serovar Typhi (Salmonel... 28 9.8
GENBANK|AF473940|AF473940 Uncultured alpha proteobacterium 128-7 16S ... 28 9.8
GENBANK|AF432270|AF432270 Uncultured Cytophaga sp. FO-0d-8 16S riboso... 28 9.8
GENBANK|AF330512|AF330512 Shigella flexneri strain SF0270 virulence p... 28 9.8
GENBANK|AF211213|AF211213 Uncultured rumen bacterium 523cARRO 16S rib... 28 9.8
GENBANK|AF055223|AF055223 Uncultured marine bacterium pC2-105 16S rib... 28 9.8
GENBANK|AE017203|AE017203 Lactobacillus johnsonii NCC 533 section 4 ... 28 9.8
GENBANK|AE016847|AE016847 Salmonella enterica subsp. enterica serovar... 28 9.8
GENBANK|AE015729|AE015729 Shewanella oneidensis MR-1 section 278 of 4... 28 9.8
GENBANK|AE010304|AE010304 Methanopyrus kandleri AV19 section 3 of 157... 28 9.8
GENBANK|AE006749|AE006749 Sulfolobus solfataricus section 108 of 272 ... 28 9.8
>GENBANK|AJ002565|MBAJ2565 Marine bacterium (isolate SRF3) 16S rRNA gene.
Length = 1300
Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
||||||||||||||||||||
Sbjct: 562 ctcaagactaccagtattag 543
>GENBANK|AY499668|AY499668 Uncultured alpha proteobacterium clone
Dover451 16S ribosomal RNA gene, partial sequence.
Length = 977
Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
||||||||||||||||||||
Sbjct: 138 ctcaagactaccagtattag 119
>GENBANK|AY323141|AY323141 Uncultured alpha proteobacterium clone A115-23
16S ribosomal RNA gene, partial sequence.
Length = 500
Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
||||||||||||||||||||
Sbjct: 264 ctcaagactaccagtattag 245
>GENBANK|AJ391183|MAL391183 marine alpha proteobacterium AS-22 partial
16S rRNA gene for 16S ribosomal RNA.
Length = 1430
Score = 38.2 bits (19), Expect = 0.010
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||||||||||||
Sbjct: 570 ctcaagactaccagtatta 552
>GENBANK|AY258103|AY258103 Bacterium DG1133 small subunit ribosomal RNA
gene, partial sequence.
Length = 1373
Score = 38.2 bits (19), Expect = 0.010
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||||||||||||
Sbjct: 562 ctcaagactaccagtatta 544
>GENBANK|AY258076|AY258076 Bacterium DG877 small subunit ribosomal RNA
gene, partial sequence.
Length = 1358
Score = 38.2 bits (19), Expect = 0.010
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||||||||||||
Sbjct: 562 ctcaagactaccagtatta 544
>GENBANK|AY136103|AY136103 Roseobacter sp. MED007 16S rRNA gene partial
sequence.
Length = 540
Score = 38.2 bits (19), Expect = 0.010
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||||||||||||
Sbjct: 489 ctcaagactaccagtatta 471
>GENBANK|AJ133762|APR133762 alpha Proteobacterium 16S rRNA gene isolate
TH1.
Length = 1429
Score = 38.2 bits (19), Expect = 0.010
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||||||||||||
Sbjct: 581 ctcaagactaccagtatta 563
>GENBANK|AB047139|AB047139 Uncultured eubacterium SW3 gene for 16S rRNA
partial sequence.
Length = 560
Score = 38.2 bits (19), Expect = 0.010
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||||||||||||
Sbjct: 291 ctcaagactaccagtatta 273
>GENBANK|AB018689|AB018689 Alpha proteobacterium MBIC3951 gene for 16S
rRNA, partial sequence.
Length = 1389
Score = 38.2 bits (19), Expect = 0.010
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||||||||||||
Sbjct: 559 ctcaagactaccagtatta 541
>GENBANK|AJ487526|UCY487526 Uncultured cytophaga sp. partial 16S rRNA
gene, clone NCh11-LL2.
Length = 412
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 234 ctcaagactaccagtat 218
>GENBANK|AJ518280|UBA518280 Unidentified bacterium partial 16S rRNA gene
clone Mul2P3-25.
Length = 480
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 480 ctcaagactaccagtat 464
>GENBANK|AJ319865|UBA319865 Uncultured bacterium SB-83-CS partial 16S
rRNA gene.
Length = 541
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 294 ctcaagactaccagtat 278
>GENBANK|AJ295441|UBA295441 Rape rhizosphere bacterium tsb051 partial 16S
rRNA gene.
Length = 1300
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 570 ctcaagactaccagtat 554
>GENBANK|Y10171|RSRH16S Rhizobium sp. 16S rRNA gene strain RH 44 651bp.
Length = 651
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 523 ctcaagactaccagtat 507
>GENBANK|Y10176|RS16SCIAM Rhizobium sp. 16S rRNA gene strain CIAM 2927.
Length = 1332
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 512 ctcaagactaccagtat 496
>GENBANK|D12790|PRU16SRRNA Phyllobacterium rubiacearum 16S rRNA gene.
Length = 1430
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 571 ctcaagactaccagtat 555
>GENBANK|D12789|PMY16SRRNA Phyllobacterium myrsinacearum 16S rRNA gene.
Length = 1438
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 571 ctcaagactaccagtat 555
>GENBANK|AJ011330|PMY011330 Phyllobacterium myrsinacearum 16S rRNA gene
isolate HM35.
Length = 1462
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 580 ctcaagactaccagtat 564
>GENBANK|U37762|PLU37762 Prionitis lanceolata gall symbiont 16S ribosomal
RNA gene, complete sequence.
Length = 1466
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 598 ctcaagactaccagtat 582
>GENBANK|X98419|NSP16SRRP Nanobacterium sp. 16S rRNA gene partial.
Length = 1406
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 570 ctcaagactaccagtat 554
>GENBANK|X98418|NS16SRRNP N.sanguineum 16S rRNA gene partial.
Length = 1406
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 570 ctcaagactaccagtat 554
>GENBANK|AJ439363|MBA439363 alpha proteobacterium LTs-4 partial 16S rRNA
gene, isolate LTs-4.
Length = 700
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 275 ctcaagactaccagtat 259
>GENBANK|X79412|DB16SRRN D.bakii 16S rDNA.
Length = 1473
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 635 ctcaagactaccagtat 619
>GENBANK|X98249|BS16SRRN Phyllobacterium sp. 16S rRNA gene.
Length = 730
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 102 ctcaagactaccagtat 86
>GENBANK|AY515429|AY515429 Uncultured alpha proteobacterium strain
GWS-BW-H122M 16S ribosomal RNA gene, partial sequence.
Length = 691
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 587 ctcaagactaccagtat 571
>GENBANK|AY512821|AY512821 Phyllobacterium myrsinacearum 16S ribosomal
RNA gene, partial sequence.
Length = 1465
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 585 ctcaagactaccagtat 569
>GENBANK|AY437630|AY437630 Paracoccus sp. AI-21 16S ribosomal RNA gene
partial sequence.
Length = 890
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 567 ctcaagactaccagtat 551
>GENBANK|AY424898|AY424898 Oceanicola batsensis strain HTCC2597 16S
ribosomal RNA gene, partial sequence.
Length = 1425
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 589 ctcaagactaccagtat 573
>GENBANK|AY348736|AY348736 Uncultured alpha proteobacterium clone 4GB-13
16S ribosomal RNA gene, partial sequence.
Length = 620
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 394 ctcaagactaccagtat 378
>GENBANK|AY345433|AY345433 Bacterium K2-19 16S ribosomal RNA gene
partial sequence.
Length = 1449
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 608 ctcaagactaccagtat 592
>GENBANK|AY345413|AY345413 Bacterium K2-53B 16S ribosomal RNA gene
partial sequence.
Length = 1454
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 616 ctcaagactaccagtat 600
>GENBANK|AY344419|AY344419 Unidentified bacterium clone L4-84 16S
ribosomal RNA gene, partial sequence.
Length = 1019
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 163 ctcaagactaccagtat 147
>GENBANK|AY332145|AY332145 Alpha proteobacterium GWS-AG-H267 16S
ribosomal RNA gene, partial sequence.
Length = 695
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 583 ctcaagactaccagtat 567
>GENBANK|AY327211|AY327211 Uncultured bacterium clone ZB31 16S ribosomal
RNA gene, partial sequence.
Length = 795
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 646 ctcaagactaccagtat 630
>GENBANK|AY323147|AY323147 Uncultured alpha proteobacterium clone
A115-14t 16S ribosomal RNA gene, partial sequence.
Length = 450
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 223 ctcaagactaccagtat 207
>GENBANK|AY323144|AY323144 Uncultured alpha proteobacterium clone A115-30
16S ribosomal RNA gene, partial sequence.
Length = 500
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 267 ctcaagactaccagtat 251
>GENBANK|AY263729|AY263729 Uncultured alpha proteobacterium clone FBR15
16S ribosomal RNA gene, partial sequence.
Length = 523
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 274 ctcaagactaccagtat 258
>GENBANK|AY258094|AY258094 Bacterium DG981 small subunit ribosomal RNA
gene, partial sequence.
Length = 1369
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 560 ctcaagactaccagtat 544
>GENBANK|AY193283|AY193283 Uncultured proteobacterium clone BTM93 16S
ribosomal RNA gene, partial sequence.
Length = 727
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 283 ctcaagactaccagtat 267
>GENBANK|AY193281|AY193281 Uncultured proteobacterium clone BTM81 16S
ribosomal RNA gene, partial sequence.
Length = 754
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 297 ctcaagactaccagtat 281
>GENBANK|AY193233|AY193233 Uncultured proteobacterium clone BMS95 16S
ribosomal RNA gene, partial sequence.
Length = 698
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 572 ctcaagactaccagtat 556
>GENBANK|AY193226|AY193226 Uncultured proteobacterium clone BMS38 16S
ribosomal RNA gene, partial sequence.
Length = 702
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 572 ctcaagactaccagtat 556
>GENBANK|AY193221|AY193221 Uncultured proteobacterium clone BMS8 16S
ribosomal RNA gene, partial sequence.
Length = 683
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 247 ctcaagactaccagtat 231
>GENBANK|AY193156|AY193156 Uncultured proteobacterium clone BMS13 16S
ribosomal RNA gene, partial sequence.
Length = 1011
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 575 ctcaagactaccagtat 559
>GENBANK|AY162112|AY162112 Alpha proteobacterium GMD13C04 small subunit
ribosomal RNA gene, partial sequence.
Length = 1322
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 593 ctcaagactaccagtat 577
>GENBANK|AY162099|AY162099 Alpha proteobacterium GMD21G01 small subunit
ribosomal RNA gene, partial sequence.
Length = 1320
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 593 ctcaagactaccagtat 577
>GENBANK|AY162095|AY162095 Alpha proteobacterium GMDsbM4 small subunit
ribosomal RNA gene, partial sequence.
Length = 1318
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 592 ctcaagactaccagtat 576
>GENBANK|AY162085|AY162085 Alpha proteobacterium GMD38A8 small subunit
ribosomal RNA gene, partial sequence.
Length = 1325
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 593 ctcaagactaccagtat 577
>GENBANK|AY148320|AY148320 Uncultured alpha proteobacterium B7-20G 16S
ribosomal RNA gene, partial sequence.
Length = 504
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 279 ctcaagactaccagtat 263
>GENBANK|AY075131|AY075131 Uncultured marine bacterium Vent 24 16S
ribosomal RNA gene, partial sequence.
Length = 944
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 635 ctcaagactaccagtat 619
>GENBANK|AF547039|AF547039 Bacterium 320 16S ribosomal RNA gene partial
sequence.
Length = 549
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 286 ctcaagactaccagtat 270
>GENBANK|AF544961|AF544961 Uncultured alpha proteobacterium clone 6-7-1
16S ribosomal RNA gene, partial sequence.
Length = 450
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 221 ctcaagactaccagtat 205
>GENBANK|AF544952|AF544952 Uncultured alpha proteobacterium clone 5-7-3
16S ribosomal RNA gene, partial sequence.
Length = 450
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 221 ctcaagactaccagtat 205
>GENBANK|AF544949|AF544949 Uncultured alpha proteobacterium clone 3-7-2
16S ribosomal RNA gene, partial sequence.
Length = 450
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 221 ctcaagactaccagtat 205
>GENBANK|AF544935|AF544935 Uncultured alpha proteobacterium clone 1-7-10
16S ribosomal RNA gene, partial sequence.
Length = 500
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 271 ctcaagactaccagtat 255
>GENBANK|AF544898|AF544898 Uncultured alpha proteobacterium clone A191-9
16S ribosomal RNA gene, partial sequence.
Length = 450
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 215 ctcaagactaccagtat 199
>GENBANK|AF513936|AF513936 Uncultured Rhodobacter group bacterium clone
PH-B13 16S ribosomal RNA gene, partial sequence.
Length = 1311
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 591 ctcaagactaccagtat 575
>GENBANK|AF513934|AF513934 Uncultured Rhodobacter group bacterium clone
LAS-B23N 16S ribosomal RNA gene, partial sequence.
Length = 1426
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 591 ctcaagactaccagtat 575
>GENBANK|AF513437|AF513437 Rhodobacter group bacterium LA5 16S ribosomal
RNA gene, partial sequence.
Length = 1364
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 546 ctcaagactaccagtat 530
>GENBANK|AF473967|AF473967 Uncultured alpha proteobacterium 34-34 16S
ribosomal RNA gene, partial sequence.
Length = 464
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 245 ctcaagactaccagtat 229
>GENBANK|AF473965|AF473965 Uncultured alpha proteobacterium 34-27 16S
ribosomal RNA gene, partial sequence.
Length = 502
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 283 ctcaagactaccagtat 267
>GENBANK|AF473915|AF473915 Uncultured alpha proteobacterium 128-19L 16S
ribosomal RNA gene, partial sequence.
Length = 1371
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 547 ctcaagactaccagtat 531
>GENBANK|AF473914|AF473914 Uncultured alpha proteobacterium 128-19 16S
ribosomal RNA gene, partial sequence.
Length = 477
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 245 ctcaagactaccagtat 229
>GENBANK|AF465360|AF465360 Ruegeria sp. UST991130-042 16S ribosomal RNA
gene, partial sequence.
Length = 664
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 238 ctcaagactaccagtat 222
>GENBANK|AF449230|AF449230 Uncultured epsilon proteobacterium clone
R103-B63 16S ribosomal RNA gene, partial sequence.
Length = 1432
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 603 ctcaagactaccagtat 587
>GENBANK|AF441726|AF441726 Alpha proteobacterium Kaza-27 16S ribosomal
RNA gene, partial sequence.
Length = 1517
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 596 ctcaagactaccagtat 580
>GENBANK|AF367399|AF367399 Uncultured Rhodobacter group bacterium clone
D103 16S ribosomal RNA gene, partial sequence.
Length = 559
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 290 ctcaagactaccagtat 274
>GENBANK|AF290485|AF290485 Uncultured sheep mite bacterium Llangefni 80
16S ribosomal RNA gene, partial sequence.
Length = 1204
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 337 ctcaagactaccagtat 321
>GENBANK|AF290484|AF290484 Uncultured sheep mite bacterium Llangefni 18
16S ribosomal RNA gene, partial sequence.
Length = 1436
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 569 ctcaagactaccagtat 553
>GENBANK|AF290483|AF290483 Uncultured sheep mite bacterium Llangefni 28
16S ribosomal RNA gene, partial sequence.
Length = 1437
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 570 ctcaagactaccagtat 554
>GENBANK|AF259635|AF259635 Uncultured Rhodobacter group bacterium
CtaxTah-4 16S ribosomal RNA gene, partial sequence.
Length = 864
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 322 ctcaagactaccagtat 306
>GENBANK|AF259606|AF259606 Uncultured Ruegeria CtaxMed-21 16S ribosomal
RNA gene, partial sequence.
Length = 859
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 322 ctcaagactaccagtat 306
>GENBANK|AF214121|AF214121 Bacterium P91635 16S ribosomal RNA gene
partial sequence.
Length = 715
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 458 ctcaagactaccagtat 442
>GENBANK|AF214120|AF214120 Bacterium P91650 16S ribosomal RNA gene
partial sequence.
Length = 884
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 497 ctcaagactaccagtat 481
>GENBANK|AF186702|AF186702 Phyllobacterium sp. MA2830 16S ribosomal RNA
gene, partial sequence.
Length = 889
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 138 ctcaagactaccagtat 122
>GENBANK|AF159654|AF159654 Uncultured marine eubacterium HstpL2 16S
ribosomal RNA gene, partial sequence.
Length = 967
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 556 ctcaagactaccagtat 540
>GENBANK|AF107210|AF107210 Roseobacter sp. (Prionitis decipiens symbiont)
16S ribosomal RNA gene, partial sequence.
Length = 1275
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 572 ctcaagactaccagtat 556
>GENBANK|AF013537|AF013537 Uncultivated soil bacterium clone C116 16S
ribosomal RNA gene, partial sequence.
Length = 662
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 545 ctcaagactaccagtat 529
>GENBANK|AB116403|AB116403 Uncultured Bacteroidetes bacterium gene for
16S rRNA, partial sequence, clone: K200.
Length = 1153
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 310 ctcaagactaccagtat 294
>GENBANK|AB100001|AB100001 Uncultured bacterium gene for 16S rRNA
partial sequences, clone: IndB1-58.
Length = 1256
Score = 34.2 bits (17), Expect = 0.16
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
|||||||||||||||||
Sbjct: 596 ctcaagactaccagtat 580
>GENBANK|AJ311503|UCY311503 Uncultured cytophaga Sau 2 partial 16S rRNA
gene.
Length = 544
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 292 tcaagactaccagtat 277
>GENBANK|U42010|CSU42010 Capnocytophaga sp. 16S ribosomal RNA gene
partial sequence.
Length = 1463
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 643 tcaagactaccagtat 628
>GENBANK|U41352|CSU41352 Capnocytophaga sp. LMG 12116 16S ribosomal RNA
gene, partial sequence.
Length = 1462
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 643 tcaagactaccagtat 628
>GENBANK|U41348|CGU41348 Capnocytophaga granulosa LMG 12119 16S ribosomal
RNA gene, partial sequence.
Length = 1460
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 641 tcaagactaccagtat 626
>GENBANK|U41347|CGU41347 Capnocytophaga granulosa LMG16022 T 16S
ribosomal RNA gene, partial sequence.
Length = 1429
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 614 tcaagactaccagtat 599
>GENBANK|U41346|CGU41346 Capnocytophaga gingivalis LMG 12118 16S
ribosomal RNA gene, partial sequence.
Length = 1463
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 643 tcaagactaccagtat 628
>GENBANK|X97248|CG16SRRN2 C.granulosa 16S rRNA gene.
Length = 1417
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 599 tcaagactaccagtat 584
>GENBANK|X67608|CG16SR C.gingivalis gene for 16S ribosomal RNA.
Length = 1453
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 636 tcaagactaccagtat 621
>GENBANK|L14639|CCYRRDE Capnocytophaga gingivalis 16S ribosomal RNA.
Length = 1462
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 643 tcaagactaccagtat 628
>GENBANK|AY509333|AY509333 Uncultured Bacteroidetes bacterium clone
LiUU-9-179 16S ribosomal RNA gene, partial sequence.
Length = 762
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 577 tcaagactaccagtat 562
>GENBANK|AY499900|AY499900 Uncultured alpha proteobacterium clone
Nubeena204 16S ribosomal RNA gene, partial sequence.
Length = 683
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 138 ctcaagactagcagtattag 119
>GENBANK|AY429468|AY429468 Capnocytophaga sp. P1 oral clone P4GA_52 16S
ribosomal RNA gene, partial sequence.
Length = 1450
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 614 tcaagactaccagtat 599
>GENBANK|AY193260|AY193260 Uncultured proteobacterium clone BTM13 16S
ribosomal RNA gene, partial sequence.
Length = 734
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 agactaccagtattag 20
||||||||||||||||
Sbjct: 279 agactaccagtattag 264
>GENBANK|AY193259|AY193259 Uncultured proteobacterium clone BTM1 16S
ribosomal RNA gene, partial sequence.
Length = 762
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 5 agactaccagtattag 20
||||||||||||||||
Sbjct: 567 agactaccagtattag 552
>GENBANK|AY165584|AY165584 Uncultured Arctic sea ice bacterium clone
ARKXVI/2-130 16S ribosomal RNA gene, partial sequence.
Length = 1356
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 555 ctcaagactagcagtattag 536
>GENBANK|AY005074|AY005074 Capnocytophaga sp. oral clone AH015 16S
ribosomal RNA gene, partial sequence.
Length = 1442
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 622 tcaagactaccagtat 607
>GENBANK|AY005073|AY005073 Capnocytophaga sp. oral strain S3 16S
ribosomal RNA gene, partial sequence.
Length = 1463
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 643 tcaagactaccagtat 628
>GENBANK|AF543295|AF543295 Capnocytophaga gingivalis 16S ribosomal RNA
gene, partial sequence.
Length = 1480
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 635 tcaagactaccagtat 620
>GENBANK|AF491883|AF491883 Flavobacteria symbiont 4 of Acromyrmex
otcospinosus 16S ribosomal RNA gene, partial sequence.
Length = 637
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 310 tcaagactaccagtat 295
>GENBANK|AF491882|AF491882 Flavobacteria symbiont 3 of Acromyrmex
otcospinosus 16S ribosomal RNA gene, partial sequence.
Length = 637
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 310 tcaagactaccagtat 295
>GENBANK|AF468274|AF468274 Uncultured bacterium clone ARKIA-130 16S
ribosomal RNA gene, partial sequence.
Length = 1356
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 555 ctcaagactagcagtattag 536
>GENBANK|AF385494|AF385494 Capnocytophaga sp. oral clone DZ074 16S
ribosomal RNA gene, partial sequence.
Length = 1501
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 630 tcaagactaccagtat 615
>GENBANK|AF277512|AF277512 Uncultured alpha proteobacterium SIC.8142 16S
ribosomal RNA gene, partial sequence.
Length = 976
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 138 ctcaagactagcagtattag 119
>GENBANK|AF201976|AF201976 Human oral bacterium AC62 16S ribosomal RNA
gene, partial sequence.
Length = 780
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 280 tcaagactaccagtat 265
>GENBANK|AF142961|AF142961 Uncultured bacterium TAYNAYA-15 16S ribosomal
RNA gene, partial sequence.
Length = 978
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 138 ctcaagactagcagtattag 119
>GENBANK|AF142958|AF142958 Uncultured bacterium TAYNAYA-12 16S ribosomal
RNA gene, partial sequence.
Length = 749
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 138 ctcaagactagcagtattag 119
>GENBANK|AF142891|AF142891 Uncultured bacterium EKHO-8 16S ribosomal RNA
gene, partial sequence.
Length = 979
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 138 ctcaagactagcagtattag 119
>GENBANK|AF142858|AF142858 Uncultured bacterium BURTON-40 16S ribosomal
RNA gene, partial sequence.
Length = 978
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 138 ctcaagactagcagtattag 119
>GENBANK|AF142829|AF142829 Uncultured bacterium BURTON-9 16S ribosomal
RNA gene, partial sequence.
Length = 978
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 138 ctcaagactagcagtattag 119
>GENBANK|AF030777|AF030777 Marine snow associated bacterium Adriatic86
16S ribosomal RNA gene, partial sequence.
Length = 1454
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
|||||||||| |||||||||
Sbjct: 594 ctcaagactagcagtattag 575
>GENBANK|AB154459|AB154459 Uncultured bacterium gene for 16S rRNA
partial sequence, clone:28w.
Length = 543
Score = 32.2 bits (16), Expect = 0.63
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtat 17
||||||||||||||||
Sbjct: 295 tcaagactaccagtat 280
>GENBANK|AB089021|AB089021 Uncultured Clostridiaceae bacterium gene for
16S rRNA, partial sequence, clone:Rs-P61.
Length = 1305
Score = 32.2 bits (16), Expect = 0.63
Identities = 19/20 (95%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtattag 20
||||||||||||||| ||||
Sbjct: 576 ctcaagactaccagttttag 557
>GENBANK|AJ242822|UMA242822 Marine eubacterium 'DDGE band 5' mRNA for 16S
ribosomal RNA (16S rRNA gene), clone band 5.
Length = 515
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 251 ctcaagactagcagtatta 233
>GENBANK|U14583|UAU14583 Octadecabacter antarcticus 307 16S ribosomal RNA
gene, partial sequence.
Length = 1389
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 574 ctcaagactaacagtatta 556
>GENBANK|U70682|U70682 Unidentified alpha proteobacterium OM65 16S
ribosomal RNA gene, partial sequence.
Length = 644
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 592 ctcaagactagcagtatta 574
>GENBANK|U73725|OAU73725 Octadecabacter arcticus 238 16S ribosomal RNA
gene, partial sequence.
Length = 1389
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 574 ctcaagactaacagtatta 556
>GENBANK|D88523|D88523 Agrobacterium gelatinovorum gene for 16S rRNA
partial sequence.
Length = 1390
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 571 ctcaagactagcagtatta 553
>GENBANK|L16495|BNRRR16SAV Bacteroides forsythus 16S ribosomal RNA gene
complete sequence.
Length = 1466
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 653 ctcaagactaccagt 639
>GENBANK|X73962|BFRRNA B.forsythus gene for 16S rRNA.
Length = 1450
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 614 ctcaagactaccagt 600
>GENBANK|AY500027|AY500027 Uncultured Bacteroidetes bacterium clone
Nubeena114 16S ribosomal RNA gene, partial sequence.
Length = 984
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 138 ctcaagactaccagt 124
>GENBANK|AY499448|AY499448 Uncultured alpha proteobacterium clone RAN-81
16S ribosomal RNA gene, partial sequence.
Length = 591
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 566 ctcaagactagcagtatta 548
>GENBANK|AY499446|AY499446 Uncultured alpha proteobacterium clone RAN-63
16S ribosomal RNA gene, partial sequence.
Length = 592
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 568 ctcaagactagcagtatta 550
>GENBANK|AY499414|AY499414 Uncultured alpha proteobacterium clone RAI-5
16S ribosomal RNA gene, partial sequence.
Length = 589
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 568 ctcaagactagcagtatta 550
>GENBANK|AY442178|AY442178 Rhodobacteraceae bacterium JC2049 16S
ribosomal RNA gene, partial sequence.
Length = 1382
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 5 agactaccagtatta 19
|||||||||||||||
Sbjct: 565 agactaccagtatta 551
>GENBANK|AY360524|AY360524 Uncultured proteobacterium clone BSBf3-20/40m
16S ribosomal RNA gene, partial sequence.
Length = 835
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 598 ctcaagactagcagtatta 580
>GENBANK|AY360519|AY360519 Uncultured proteobacterium clone BSBd6-20/40m
16S ribosomal RNA gene, partial sequence.
Length = 838
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 594 ctcaagactagcagtatta 576
>GENBANK|AY360517|AY360517 Uncultured proteobacterium clone BSBb3-20/40m
16S ribosomal RNA gene, partial sequence.
Length = 829
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 589 ctcaagactagcagtatta 571
>GENBANK|AY349402|AY349402 Prevotella sp. oral clone IK062 16S ribosomal
RNA gene, partial sequence.
Length = 1518
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 647 ctcaagactaccagt 633
>GENBANK|AY349399|AY349399 Prevotella sp. oral clone HF050 16S ribosomal
RNA gene, partial sequence.
Length = 1527
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 647 ctcaagactaccagt 633
>GENBANK|AY348734|AY348734 Uncultured alpha proteobacterium clone 4GB-95
16S ribosomal RNA gene, partial sequence.
Length = 454
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 230 ctcaagactagcagtatta 212
>GENBANK|AY323154|AY323154 Uncultured alpha proteobacterium clone
A115-95t 16S ribosomal RNA gene, partial sequence.
Length = 450
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 232 ctcaagactagcagtatta 214
>GENBANK|AY323151|AY323151 Uncultured alpha proteobacterium clone A133-47
16S ribosomal RNA gene, partial sequence.
Length = 500
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 278 ctcaagactagcagtatta 260
>GENBANK|AY274236|AY274236 Uncultured alpha proteobacterium isolate DGGE
band GWS-AG-2 16S ribosomal RNA gene, partial sequence.
Length = 539
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 272 ctcaagactagcagtatta 254
>GENBANK|AY274228|AY274228 Uncultured alpha proteobacterium isolate DGGE
band GWS-FL-2 16S ribosomal RNA gene, partial sequence.
Length = 533
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 285 ctcaagactagcagtatta 267
>GENBANK|AY244953|AY244953 Uncultured rumen bacterium clone BE37 16S
ribosomal RNA gene, partial sequence.
Length = 1497
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 652 ctcaagactaccagt 638
>GENBANK|AY244948|AY244948 Uncultured rumen bacterium clone BE21 16S
ribosomal RNA gene, partial sequence.
Length = 1497
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 652 ctcaagactaccagt 638
>GENBANK|AY244946|AY244946 Uncultured rumen bacterium clone BE32 16S
ribosomal RNA gene, partial sequence.
Length = 1498
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 653 ctcaagactaccagt 639
>GENBANK|AY244945|AY244945 Uncultured rumen bacterium clone BE30 16S
ribosomal RNA gene, partial sequence.
Length = 1496
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 653 ctcaagactaccagt 639
>GENBANK|AY244937|AY244937 Uncultured rumen bacterium clone BE17 16S
ribosomal RNA gene, partial sequence.
Length = 1497
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 652 ctcaagactaccagt 638
>GENBANK|AY244932|AY244932 Uncultured rumen bacterium clone BE22 16S
ribosomal RNA gene, partial sequence.
Length = 1498
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 654 ctcaagactaccagt 640
>GENBANK|AY244929|AY244929 Uncultured rumen bacterium clone BE12 16S
ribosomal RNA gene, partial sequence.
Length = 1497
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 652 ctcaagactaccagt 638
>GENBANK|AY244927|AY244927 Uncultured rumen bacterium clone BE10 16S
ribosomal RNA gene, partial sequence.
Length = 1497
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 653 ctcaagactaccagt 639
>GENBANK|AY244924|AY244924 Uncultured rumen bacterium clone BE7 16S
ribosomal RNA gene, partial sequence.
Length = 1497
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 653 ctcaagactaccagt 639
>GENBANK|AY244909|AY244909 Uncultured rumen bacterium clone BF31 16S
ribosomal RNA gene, partial sequence.
Length = 1498
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 653 ctcaagactaccagt 639
>GENBANK|AY244906|AY244906 Uncultured rumen bacterium clone BF28 16S
ribosomal RNA gene, partial sequence.
Length = 1498
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 653 ctcaagactaccagt 639
>GENBANK|AY244901|AY244901 Uncultured rumen bacterium clone BF23 16S
ribosomal RNA gene, partial sequence.
Length = 1498
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 652 ctcaagactaccagt 638
>GENBANK|AY244900|AY244900 Uncultured rumen bacterium clone BF22 16S
ribosomal RNA gene, partial sequence.
Length = 1499
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 654 ctcaagactaccagt 640
>GENBANK|AY244899|AY244899 Uncultured rumen bacterium clone BF21 16S
ribosomal RNA gene, partial sequence.
Length = 1497
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 652 ctcaagactaccagt 638
>GENBANK|AY244897|AY244897 Uncultured rumen bacterium clone BF19 16S
ribosomal RNA gene, partial sequence.
Length = 1496
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 653 ctcaagactaccagt 639
>GENBANK|AY244879|AY244879 Uncultured rumen bacterium clone BF1 16S
ribosomal RNA gene, partial sequence.
Length = 1497
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 652 ctcaagactaccagt 638
>GENBANK|AY239007|AY239007 Marine bacterium HP24 16S ribosomal RNA gene
partial sequence.
Length = 626
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 586 ctcaagactagcagtatta 568
>GENBANK|AY171330|AY171330 Uncultured bacterium clone s38 16S ribosomal
RNA gene, partial sequence.
Length = 1022
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 290 ctcaagactagcagtatta 272
>GENBANK|AY171321|AY171321 Uncultured bacterium clone s109 16S ribosomal
RNA gene, partial sequence.
Length = 1027
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 291 ctcaagactagcagtatta 273
>GENBANK|AY171302|AY171302 Uncultured bacterium clone s29 16S ribosomal
RNA gene, partial sequence.
Length = 1018
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 291 ctcaagactagcagtatta 273
>GENBANK|AY167337|AY167337 Octadecabacter sp. ANT9202 16S ribosomal RNA
gene, partial sequence.
Length = 1379
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 553 ctcaagactaacagtatta 535
>GENBANK|AY167336|AY167336 Octadecabacter sp. ANT9191 16S ribosomal RNA
gene, partial sequence.
Length = 1404
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 570 ctcaagactaacagtatta 552
>GENBANK|AY167335|AY167335 Octadecabacter sp. ANT9190 16S ribosomal RNA
gene, partial sequence.
Length = 1418
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 571 ctcaagactaacagtatta 553
>GENBANK|AY167258|AY167258 Octadecabacter sp. ANT9237 16S ribosomal RNA
gene, partial sequence.
Length = 1418
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 573 ctcaagactaacagtatta 555
>GENBANK|AY167256|AY167256 Octadecabacter sp. ANT9232 16S ribosomal RNA
gene, partial sequence.
Length = 1420
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 573 ctcaagactaacagtatta 555
>GENBANK|AY167255|AY167255 Octadecabacter sp. ANT9212 16S ribosomal RNA
gene, partial sequence.
Length = 1350
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 543 ctcaagactaacagtatta 525
>GENBANK|AY167252|AY167252 Octadecabacter sp. ANT9035 16S ribosomal RNA
gene, partial sequence.
Length = 1420
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 573 ctcaagactaacagtatta 555
>GENBANK|AY165579|AY165579 Uncultured Antarctic sea ice bacterium clone
ANTXI/4_14-50 16S ribosomal RNA gene, partial sequence.
Length = 1361
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 555 ctcaagactaacagtatta 537
>GENBANK|AY165505|AY165505 Uncultured Rhodobacteraceae bacterium clone
RCA12-2 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165504|AY165504 Uncultured Rhodobacteraceae bacterium clone
RCA12-1 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165503|AY165503 Uncultured Rhodobacteraceae bacterium clone
RCA7-2 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165502|AY165502 Uncultured Rhodobacteraceae bacterium clone
RCA7-1 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165501|AY165501 Uncultured Rhodobacteraceae bacterium clone
RCA4 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165500|AY165500 Uncultured Rhodobacteraceae bacterium clone
RCA9 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165499|AY165499 Uncultured Rhodobacteraceae bacterium clone
RCA3 16S ribosomal RNA gene, partial sequence.
Length = 531
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165498|AY165498 Uncultured Rhodobacteraceae bacterium clone
RCA5 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165497|AY165497 Uncultured Rhodobacteraceae bacterium clone
RCA8 16S ribosomal RNA gene, partial sequence.
Length = 492
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 155 ctcaagactagcagtatta 137
>GENBANK|AY165496|AY165496 Uncultured Rhodobacteraceae bacterium clone
RCA2 16S ribosomal RNA gene, partial sequence.
Length = 531
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165495|AY165495 Uncultured Rhodobacteraceae bacterium clone
RCA6 16S ribosomal RNA gene, partial sequence.
Length = 466
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 129 ctcaagactagcagtatta 111
>GENBANK|AY165494|AY165494 Uncultured Rhodobacteraceae bacterium clone
RCA11-1 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165493|AY165493 Uncultured Rhodobacteraceae bacterium clone
RCA11-3a 16S ribosomal RNA gene, partial sequence.
Length = 410
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 73 ctcaagactagcagtatta 55
>GENBANK|AY165492|AY165492 Uncultured Rhodobacteraceae bacterium clone
RCA11-2 16S ribosomal RNA gene, partial sequence.
Length = 912
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 575 ctcaagactagcagtatta 557
>GENBANK|AY165491|AY165491 Uncultured Rhodobacteraceae bacterium clone
RCA11-3b 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY165490|AY165490 Uncultured Rhodobacteraceae bacterium clone
RCA11-4 16S ribosomal RNA gene, partial sequence.
Length = 529
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 192 ctcaagactagcagtatta 174
>GENBANK|AY165489|AY165489 Uncultured Rhodobacteraceae bacterium clone
RCA11-5 16S ribosomal RNA gene, partial sequence.
Length = 912
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 575 ctcaagactagcagtatta 557
>GENBANK|AY165488|AY165488 Uncultured Rhodobacteraceae bacterium clone
RCA10-2 16S ribosomal RNA gene, partial sequence.
Length = 882
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 575 ctcaagactagcagtatta 557
>GENBANK|AY165487|AY165487 Uncultured Rhodobacteraceae bacterium clone
RCA10-1 16S ribosomal RNA gene, partial sequence.
Length = 532
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 195 ctcaagactagcagtatta 177
>GENBANK|AY160809|AY160809 Uncultured bacterium clone COB P3-7 16S
ribosomal RNA gene, partial sequence.
Length = 856
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 604 ctcaagactaccagt 590
>GENBANK|AY160806|AY160806 Uncultured bacterium clone COB P1-24 16S
ribosomal RNA gene, partial sequence.
Length = 1406
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 604 ctcaagactaccagt 590
>GENBANK|AY145628|AY145628 Uncultured alpha proteobacterium clone
DC11-80-6 16S ribosomal RNA gene, partial sequence.
Length = 330
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 81 ctcaagactagcagtatta 63
>GENBANK|AY145627|AY145627 Uncultured alpha proteobacterium clone
DC11-80-5 16S ribosomal RNA gene, partial sequence.
Length = 479
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 230 ctcaagactagcagtatta 212
>GENBANK|AY145625|AY145625 Uncultured alpha proteobacterium clone
DC11-80-2 16S ribosomal RNA gene, partial sequence.
Length = 1390
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 575 ctcaagactagcagtatta 557
>GENBANK|AY145624|AY145624 Uncultured alpha proteobacterium clone
DC11-80-1 16S ribosomal RNA gene, partial sequence.
Length = 523
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 274 ctcaagactagcagtatta 256
>GENBANK|AY145590|AY145590 Uncultured alpha proteobacterium clone
DC5-80-4 16S ribosomal RNA gene, partial sequence.
Length = 511
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 262 ctcaagactagcagtatta 244
>GENBANK|AY145589|AY145589 Uncultured alpha proteobacterium clone
DC5-80-3 16S ribosomal RNA gene, partial sequence.
Length = 1390
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 575 ctcaagactagcagtatta 557
>GENBANK|AY145588|AY145588 Uncultured alpha proteobacterium clone
DC5-80-2 16S ribosomal RNA gene, partial sequence.
Length = 523
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 274 ctcaagactagcagtatta 256
>GENBANK|AY136124|AY136124 Roseobacter sp. RED15 16S ribosomal RNA gene
partial sequence.
Length = 718
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 519 ctcaagactagcagtatta 501
>GENBANK|AY135669|AY135669 Uncultured bacterium clone ANT18/2_19 16S
ribosomal RNA gene, partial sequence.
Length = 908
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 110 ctcaagactagcagtatta 92
>GENBANK|AY095827|AY095827 Uncultured Rhodobacter group bacterium
ARCT2-13 16S ribosomal RNA gene, partial sequence.
Length = 592
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AY095820|AY095820 Uncultured Rhodobacter group bacterium ARCT2-4
16S ribosomal RNA gene, partial sequence.
Length = 566
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF001377|APAF001377 Octadecobacter sp. IC146 16S ribosomal RNA
gene, partial sequence.
Length = 1408
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 572 ctcaagactaacagtatta 554
>GENBANK|AF544926|AF544926 Uncultured alpha proteobacterium clone 4-6-1
16S ribosomal RNA gene, partial sequence.
Length = 450
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 224 ctcaagactagcagtatta 206
>GENBANK|AF544882|AF544882 Uncultured alpha proteobacterium clone D1-36
16S ribosomal RNA gene, partial sequence.
Length = 451
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 261 ctcaagactagcagtatta 243
>GENBANK|AF544206|AF544206 Rumen bacterium YS1 16S ribosomal RNA gene
partial sequence.
Length = 1534
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 668 ctcaagactaccagt 654
>GENBANK|AF497867|AF497867 Uncultured alpha proteobacterium isolate
WB11-28 16S ribosomal RNA gene, partial sequence.
Length = 523
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 274 ctcaagactagcagtatta 256
>GENBANK|AF497861|AF497861 Uncultured alpha proteobacterium isolate
WM11-37 16S ribosomal RNA gene, partial sequence.
Length = 523
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 274 ctcaagactagcagtatta 256
>GENBANK|AF497860|AF497860 Uncultured alpha proteobacterium isolate
WM8-15 16S ribosomal RNA gene, partial sequence.
Length = 523
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 274 ctcaagactagcagtatta 256
>GENBANK|AF497859|AF497859 Uncultured alpha proteobacterium isolate
WM5-49 16S ribosomal RNA gene, partial sequence.
Length = 523
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 274 ctcaagactagcagtatta 256
>GENBANK|AF473978|AF473978 Uncultured alpha proteobacterium 34-65 16S
ribosomal RNA gene, partial sequence.
Length = 464
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 245 ctcaagactagcagtatta 227
>GENBANK|AF473977|AF473977 Uncultured bacterium 34-63 16S ribosomal RNA
gene, partial sequence.
Length = 473
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 246 ctcaagactagcagtatta 228
>GENBANK|AF473933|AF473933 Uncultured alpha proteobacterium 128-49 16S
ribosomal RNA gene, partial sequence.
Length = 485
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 289 ctcaagactagcagtatta 271
>GENBANK|AF468379|AF468379 Arctic sea ice bacterium ARK10285 16S
ribosomal RNA gene, partial sequence.
Length = 1416
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 574 ctcaagactaacagtatta 556
>GENBANK|AF468377|AF468377 Arctic sea ice bacterium ARK10249 16S
ribosomal RNA gene, partial sequence.
Length = 1393
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 560 ctcaagactaacagtatta 542
>GENBANK|AF468372|AF468372 Arctic sea ice bacterium ARK10197 16S
ribosomal RNA gene, partial sequence.
Length = 1413
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 569 ctcaagactaacagtatta 551
>GENBANK|AF468370|AF468370 Arctic sea ice bacterium ARK10176 16S
ribosomal RNA gene, partial sequence.
Length = 1413
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 571 ctcaagactaacagtatta 553
>GENBANK|AF468369|AF468369 Arctic sea ice bacterium ARK10175-1 16S
ribosomal RNA gene, partial sequence.
Length = 1411
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 569 ctcaagactaacagtatta 551
>GENBANK|AF468368|AF468368 Arctic sea ice associated bacterium ARK10126
16S ribosomal RNA gene, partial sequence.
Length = 1416
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 572 ctcaagactaacagtatta 554
>GENBANK|AF468365|AF468365 Arctic sea ice bacterium ARK10099 16S
ribosomal RNA gene, partial sequence.
Length = 1375
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 549 ctcaagactaacagtatta 531
>GENBANK|AF468364|AF468364 Arctic sea ice bacterium ARK10092 16S
ribosomal RNA gene, partial sequence.
Length = 1414
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 571 ctcaagactaacagtatta 553
>GENBANK|AF468363|AF468363 Arctic sea ice bacterium ARK10090 16S
ribosomal RNA gene, partial sequence.
Length = 1376
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 552 ctcaagactaacagtatta 534
>GENBANK|AF468362|AF468362 Arctic sea ice bacterium ARK10081 16S
ribosomal RNA gene, partial sequence.
Length = 1373
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 550 ctcaagactaacagtatta 532
>GENBANK|AF468361|AF468361 Arctic sea ice bacterium ARK10073 16S
ribosomal RNA gene, partial sequence.
Length = 1381
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 570 ctcaagactaacagtatta 552
>GENBANK|AF468356|AF468356 Arctic sea ice bacterium ARK10029 16S
ribosomal RNA gene, partial sequence.
Length = 1417
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 570 ctcaagactaacagtatta 552
>GENBANK|AF468355|AF468355 Arctic sea ice bacterium ARK10026 16S
ribosomal RNA gene, partial sequence.
Length = 1416
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 570 ctcaagactaacagtatta 552
>GENBANK|AF468321|AF468321 Uncultured bacterium clone ARKICE-158 16S
ribosomal RNA gene, partial sequence.
Length = 1351
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 550 ctcaagactaacagtatta 532
>GENBANK|AF468299|AF468299 Uncultured bacterium clone ARKIA-135 16S
ribosomal RNA gene, partial sequence.
Length = 1355
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 549 ctcaagactaacagtatta 531
>GENBANK|AF440723|AF440723 Uncultured Rhodobacter group bacterium
ARCT1-53 16S ribosomal RNA gene, partial sequence.
Length = 833
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF440715|AF440715 Uncultured Rhodobacter group bacterium
ARCT1-37 16S ribosomal RNA gene, partial sequence.
Length = 833
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF440697|AF440697 Uncultured Rhodobacter group bacterium ARCT1-1
16S ribosomal RNA gene, partial sequence.
Length = 833
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF365998|AF365998 Marine alpha proteobacterium SB11 16S
ribosomal RNA gene, partial sequence.
Length = 792
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 569 ctcaagactagcagtatta 551
>GENBANK|AF353235|AF353235 Uncultured Roseobacter sp. clone Arctic96A-1
16S ribosomal RNA gene, partial sequence.
Length = 1420
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 572 ctcaagactagcagtatta 554
>GENBANK|AF283847|AF283847 Arctic sea ice bacterium AWS-6M1 16S ribosomal
RNA gene, partial sequence.
Length = 421
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 233 ctcaagactaacagtatta 215
>GENBANK|AF283846|AF283846 Arctic sea ice bacterium AWS-4B3 16S ribosomal
RNA gene, partial sequence.
Length = 421
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 233 ctcaagactaacagtatta 215
>GENBANK|AF277545|AF277545 Uncultured Octadecabacter ARCTIC.235 16S
ribosomal RNA gene, partial sequence.
Length = 974
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 138 ctcaagactaacagtatta 120
>GENBANK|AF277541|AF277541 Uncultured Octadecabacter ARCTIC.153 16S
ribosomal RNA gene, partial sequence.
Length = 679
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 138 ctcaagactaacagtatta 120
>GENBANK|AF277539|AF277539 Uncultured Octadecabacter ARCTIC.128 16S
ribosomal RNA gene, partial sequence.
Length = 976
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 138 ctcaagactaacagtatta 120
>GENBANK|AF245632|AF245632 Uncultured Roseobacter NAC11-3 16S ribosomal
RNA gene, partial sequence.
Length = 1414
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 547 ctcaagactagcagtatta 529
>GENBANK|AF207853|AF207853 Uncultured marine eubacterium OTU_E 16S
ribosomal RNA gene, partial sequence.
Length = 534
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 289 ctcaagactagcagtatta 271
>GENBANK|AF142851|AF142851 Uncultured bacterium BURTON-33 16S ribosomal
RNA gene, partial sequence.
Length = 971
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 138 ctcaagactaacagtatta 120
>GENBANK|AF058360|AF058360 Uncultured marine bacterium pM-68 16S
ribosomal RNA gene, 5' partial sequence.
Length = 233
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF058339|AF058339 Uncultured marine bacterium pM-33 16S
ribosomal RNA gene, 5' partial sequence.
Length = 231
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF055257|AF055257 Uncultured marine bacterium pC8-67 16S
ribosomal RNA gene, 5' partial sequence.
Length = 303
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF055230|AF055230 Uncultured marine bacterium pC2-130 16S
ribosomal RNA gene, 5' partial sequence.
Length = 300
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF055225|AF055225 Uncultured marine bacterium pC2-12 16S
ribosomal RNA gene, 5' partial sequence.
Length = 298
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 120 ctcaagactagcagtatta 102
>GENBANK|AF018540|AF018540 Unidentified rumen bacterium 30-46 16S
ribosomal RNA gene, partial sequence.
Length = 1062
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 649 ctcaagactaccagt 635
>GENBANK|AF018530|AF018530 Unidentified rumen bacterium 30-36 16S
ribosomal RNA gene, partial sequence.
Length = 1065
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 650 ctcaagactaccagt 636
>GENBANK|AF018500|AF018500 Unidentified rumen bacterium 30-1 16S
ribosomal RNA gene, partial sequence.
Length = 1064
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 649 ctcaagactaccagt 635
>GENBANK|AF018477|AF018477 Unidentified rumen bacterium 12-70 16S
ribosomal RNA gene, partial sequence.
Length = 1455
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 649 ctcaagactaccagt 635
>GENBANK|AF001771|AF001771 Unidentified rumen bacterium RF40 16S
ribosomal RNA gene, partial sequence.
Length = 1426
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 602 ctcaagactaccagt 588
>GENBANK|AF001751|AF001751 Unidentified rumen bacterium RF19 16S
ribosomal RNA gene, partial sequence.
Length = 1429
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 601 ctcaagactaccagt 587
>GENBANK|AB154432|AB154432 Uncultured bacterium gene for 16S rRNA
partial sequence, clone:1w.
Length = 524
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 275 ctcaagactagcagtatta 257
>GENBANK|AB094833|AB094833 Uncultured bacterium gene for 16S rRNA
partial sequence, clone:OHKB4.8.
Length = 841
Score = 30.2 bits (15), Expect = 2.5
Identities = 18/19 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatta 19
|||||||||| ||||||||
Sbjct: 572 ctcaagactaacagtatta 554
>GENBANK|AB053947|AB053947 Tannerella forsythensis gene for 16S rRNA
strain:TR6.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB053946|AB053946 Tannerella forsythensis gene for 16S rRNA
strain:Sai5.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB053945|AB053945 Tannerella forsythensis gene for 16S rRNA
strain:L7.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB053944|AB053944 Tannerella forsythensis gene for 16S rRNA
strain:KS16.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB053943|AB053943 Tannerella forsythensis gene for 16S rRNA
strain:Ko3.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB053942|AB053942 Tannerella forsythensis gene for 16S rRNA
strain:KM3.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB053941|AB053941 Tannerella forsythensis gene for 16S rRNA
strain:HG3.
Length = 1485
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 643 ctcaagactaccagt 629
>GENBANK|AB053940|AB053940 Tannerella forsythensis gene for 16S rRNA
strain:HA3.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB053939|AB053939 Tannerella forsythensis gene for 16S rRNA
strain:G9.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB053938|AB053938 Tannerella forsythensis gene for 16S rRNA
strain:FJ1.
Length = 1486
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 644 ctcaagactaccagt 630
>GENBANK|AB035460|AB035460 Bacteroides forsythus gene for 16S rRNA
partial sequence, strain:ATCC43037.
Length = 1466
Score = 30.2 bits (15), Expect = 2.5
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagt 15
|||||||||||||||
Sbjct: 649 ctcaagactaccagt 635
>GENBANK|AJ319866|UBA319866 Uncultured bacterium SB-25-CS partial 16S
rRNA gene.
Length = 541
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagt 15
||||||||||||||
Sbjct: 293 tcaagactaccagt 280
>GENBANK|AL603642|RME603642 Rhizobium meliloti (Sinorhizobium meliloti) 1021
complete pSymB; segment 1/6.
Length = 310050
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 6 gactaccagtatta 19
||||||||||||||
Sbjct: 31738 gactaccagtatta 31725
>GENBANK|U15180|MLU15180 Mycobacterium leprae cosmid B1756.
Length = 38675
Score = 28.2 bits (14), Expect = 9.8
Identities = 17/18 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatt 18
||||||||||| ||||||
Sbjct: 24283 ctcaagactacaagtatt 24266
>GENBANK|AL583920|MLEPRTN4 Mycobacterium leprae strain TN complete genome;
segment 4/10.
Length = 348450
Score = 28.2 bits (14), Expect = 9.8
Identities = 17/18 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtatt 18
||||||||||| ||||||
Sbjct: 244019 ctcaagactacaagtatt 244002
>GENBANK|AJ248285|CNSPAX03 Pyrococcus abyssi complete genome; segment 3/6.
Length = 307120
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 6 gactaccagtatta 19
||||||||||||||
Sbjct: 144291 gactaccagtatta 144304
>GENBANK|AY457130|AY457130 Uncultured Bacteroidetes bacterium clone
12-00_0.2um9 16S ribosomal RNA gene, partial sequence.
Length = 633
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagt 15
||||||||||||||
Sbjct: 49 tcaagactaccagt 36
>GENBANK|AY457114|AY457114 Uncultured Bacteroidetes bacterium clone
812-00_0.2um8 16S ribosomal RNA gene, partial sequence.
Length = 589
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagt 15
||||||||||||||
Sbjct: 57 tcaagactaccagt 44
>GENBANK|AY321386|AY321386 Uncultured bacterium clone K102 16S ribosomal
RNA gene, partial sequence.
Length = 881
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagt 15
||||||||||||||
Sbjct: 135 tcaagactaccagt 122
>GENBANK|AP005084|AP005084 Vibrio parahaemolyticus DNA chromosome 2 complete
sequence, 1/6.
Length = 300600
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 6 gactaccagtatta 19
||||||||||||||
Sbjct: 289421 gactaccagtatta 289434
>GENBANK|AP003587|AP003587 Nostoc sp. PCC 7120 DNA complete genome section
7/19.
Length = 343550
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 1 ctcaagactaccag 14
||||||||||||||
Sbjct: 302121 ctcaagactaccag 302134
>GENBANK|AL627281|AL627281 Salmonella enterica serovar Typhi (Salmonella typhi)
strain CT18, complete chromosome; segment 17/20.
Length = 265050
Score = 28.2 bits (14), Expect = 9.8
Identities = 17/18 (94%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtatta 19
||||||||| ||||||||
Sbjct: 213180 tcaagactatcagtatta 213163
>GENBANK|AF473940|AF473940 Uncultured alpha proteobacterium 128-7 16S
ribosomal RNA gene, partial sequence.
Length = 477
Score = 28.2 bits (14), Expect = 9.8
Identities = 16/17 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
||| |||||||||||||
Sbjct: 245 ctcnagactaccagtat 229
>GENBANK|AF432270|AF432270 Uncultured Cytophaga sp. FO-0d-8 16S ribosomal
RNA gene, partial sequence.
Length = 498
Score = 28.2 bits (14), Expect = 9.8
Identities = 16/17 (94%)
Strand = Plus / Minus
Query: 1 ctcaagactaccagtat 17
||||||||| |||||||
Sbjct: 241 ctcaagactnccagtat 225
>GENBANK|AF330512|AF330512 Shigella flexneri strain SF0270 virulence
plasmid IpaD (ipaD) gene, partial cds.
Length = 653
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 6 gactaccagtatta 19
||||||||||||||
Sbjct: 499 gactaccagtatta 486
>GENBANK|AF211213|AF211213 Uncultured rumen bacterium 523cARRO 16S
ribosomal RNA gene, partial sequence.
Length = 587
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagt 15
||||||||||||||
Sbjct: 338 tcaagactaccagt 325
>GENBANK|AF055223|AF055223 Uncultured marine bacterium pC2-105 16S
ribosomal RNA gene, 5' partial sequence.
Length = 206
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 2 tcaagactaccagt 15
||||||||||||||
Sbjct: 118 tcaagactaccagt 105
>GENBANK|AE017203|AE017203 Lactobacillus johnsonii NCC 533 section 4 of 7 of
the complete genome.
Length = 305128
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 6 gactaccagtatta 19
||||||||||||||
Sbjct: 198099 gactaccagtatta 198112
>GENBANK|AE016847|AE016847 Salmonella enterica subsp. enterica serovar Typhi
Ty2, section 14 of 16 of the complete genome.
Length = 300102
Score = 28.2 bits (14), Expect = 9.8
Identities = 17/18 (94%)
Strand = Plus / Minus
Query: 2 tcaagactaccagtatta 19
||||||||| ||||||||
Sbjct: 263701 tcaagactatcagtatta 263684
>GENBANK|AE015729|AE015729 Shewanella oneidensis MR-1 section 278 of 457 of
the complete genome.
Length = 10252
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 7 actaccagtattag 20
||||||||||||||
Sbjct: 8388 actaccagtattag 8401
>GENBANK|AE010304|AE010304 Methanopyrus kandleri AV19 section 3 of 157 of
the complete genome.
Length = 12000
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 4 aagactaccagtat 17
||||||||||||||
Sbjct: 3159 aagactaccagtat 3146
>GENBANK|AE006749|AE006749 Sulfolobus solfataricus section 108 of 272 of
the complete genome.
Length = 13962
Score = 28.2 bits (14), Expect = 9.8
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 5 agactaccagtatt 18
||||||||||||||
Sbjct: 9071 agactaccagtatt 9058
Database: /db/genbank/GBfasta_140/gbbct
Posted date: Feb 27, 2004 5:32 AM
Number of letters in database: 781,815,084
Number of sequences in database: 233,141
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 862,650
Number of Sequences: 233141
Number of extensions: 862650
Number of successful extensions: 1541
Number of sequences better than 10.0: 280
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1260
Number of HSP's gapped (non-prelim): 281
length of query: 20
length of database: 781,815,084
effective HSP length: 16
effective length of query: 4
effective length of database: 778,084,828
effective search space: 3112339312
effective search space used: 3112339312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)